› 5lmj

X-ray diffraction
2.1Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-213826 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
nanobody Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 131 amino acids
Theoretical weight: 14.6 KDa
Source organism: Lama glama
Expression system: Escherichia coli
Structure domains: Immunoglobulins

Ligands and Environments

1 bound ligand:
Ligand PO4 11 x PO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P41212
Unit cell:
a: 113.258Å b: 113.258Å c: 153.486Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.188 0.21
Expression system: Escherichia coli

Quick links

Citations

1 review citation

VHH Structural Modelling Approaches: A Critical Review.
Vishwakarma et al. (2022)
5 other articles

4 mentions without citation

Homology Modeling-Based in Silico Affinity Maturation Improves the Affinity of a Nanobody.
Cheng et al. (2019)
3 more