5lk7

Electron Microscopy
3.42Å resolution

Single particle reconstruction of slow bee paralysis virus virion at pH 5.5

Released:
Source organism: Slow bee paralysis virus
Related structures: EMD-4063

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108293 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
VP1 Chain: A
Molecule details ›
Chain: A
Length: 266 amino acids
Theoretical weight: 30.31 KDa
Source organism: Slow bee paralysis virus
UniProt:
  • Canonical: A7LM73 (Residues: 889-1154; Coverage: 9%)
Sequence domains: CRPV capsid protein like
VP2 Chain: B
Molecule details ›
Chain: B
Length: 261 amino acids
Theoretical weight: 29.82 KDa
Source organism: Slow bee paralysis virus
UniProt:
  • Canonical: A7LM73 (Residues: 177-437; Coverage: 9%)
Sequence domains: picornavirus capsid protein
Structure domains: Jelly Rolls
VP3 Chain: C
Molecule details ›
Chain: C
Length: 430 amino acids
Theoretical weight: 47.62 KDa
Source organism: Slow bee paralysis virus
UniProt:
  • Canonical: A7LM73 (Residues: 459-888; Coverage: 15%)
Sequence domains: picornavirus capsid protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.42Å
Relevant EMDB volumes: EMD-4063