› 5l7u

X-ray diffraction
2.1Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107876 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycoside hydrolase Chains: A, B
Molecule details ›
Chains: A, B
Length: 578 amino acids
Theoretical weight: 66.33 KDa
Source organism: Phocaeicola vulgatus ATCC 8482
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: A6L2E5 (Residues: 5-5, 20-582; Coverage: 98%)
Gene name: BVU_2198
Sequence domains:

Ligands and Environments

2 bound ligands:
Ligand NGA 2 x NGA
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P212121
Unit cell:
a: 55.345Å b: 142.207Å c: 145.806Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.194 0.193 0.227
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'

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Citations

8 citation in other articles

The Effects of Glucosamine and Chondroitin Sulfate on Gut Microbial Composition: A Systematic Review of Evidence from Animal and Human Studies.
Shmagel et al. (2019)
7 more