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Structure of Caulobacter crescentus VapBC1 (VapB1deltaC:VapC1 form)

Source organism: Caulobacter vibrioides CB15
Biochemical function: toxin activity
Biological process: modulation of process of another organism
Cellular component: not assigned

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GO terms

Sequence family

Pfam Protein family (Pfam)
PF01850
Domain description: PIN domain
Occurring in:
  1. Ribonuclease VapC
The deposited structure of PDB entry 5l6m contains 6 copies of Pfam domain PF01850 (PIN domain) in Ribonuclease VapC. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR022907
Domain description: VapC family
Occurring in:
  1. Ribonuclease VapC
IPR002716
Domain description: PIN domain
Occurring in:
  1. Ribonuclease VapC
IPR029060
Domain description: PIN-like domain superfamily
Occurring in:
  1. Ribonuclease VapC
IPR007159
Domain description: SpoVT-AbrB domain
Occurring in:
  1. VapB family protein
IPR037914
Domain description: SpoVT-AbrB domain superfamily
Occurring in:
  1. VapB family protein

Structure domain

CATH CATH domain
3.40.50.1010
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Rossmann fold
Homology: 5'-nuclease
Occurring in:
  1. Ribonuclease VapC
The deposited structure of PDB entry 5l6m contains 6 copies of CATH domain 3.40.50.1010 (Rossmann fold) in Ribonuclease VapC. Showing 1 copy in chain B.

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