› 5kgo

X-ray diffraction
2.9Å resolution

Structure of K. pneumonia MrkH-c-di-GMP complex

Released:
DOI: 10.2210/pdb5kgo/pdb
PDB 5kgo coloured by chain and viewed from the front.
PDB 5kgo coloured by chain and viewed from the side.
PDB 5kgo coloured by chain and viewed from the top.
Source organism: Klebsiella pneumoniae
Entry author: Schumacher M

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Type IV pilus assembly family protein Chains: A, D
Molecule details ›
Chains: A, D
Length: 235 amino acids
Theoretical weight: 27.46 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli
UniProt:
  • Canonical: G3FT00 (Residues: 1-232; Coverage: 99%)
Gene names: B5L96_03720, BL124_00031880, DDJ63_11340, DRB11_23000, EAO17_08985, FXN67_05225, G7Z27_04945, GJJ08_004650, GNE24_05305, GNG14_06445, HV479_09425, NCTC11679_00943, NCTC13443_06213, NCTC3279_03594, SAMEA3499874_00921, SAMEA3499901_01708, SAMEA3500057_00474, SAMEA3512100_02358, SAMEA3538828_01683, SAMEA3649733_01698, SAMEA3727643_02771, SAMEA3727679_00475, SAMEA4364603_00964, mrkH
Structure domains: predicted glycosyltransferase like domains

Ligands and Environments

1 bound ligand:
Ligand C2E 4 x C2E
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: P212121
Unit cell:
a: 65.573Å b: 74.569Å c: 135.538Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.226 0.289
Expression system: Escherichia coli

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