› 5jqc

X-ray diffraction
2.15Å resolution

Crystal structure putative autolysin from Listeria monocytogenes

Released:
DOI: 10.2210/pdb5jqc/pdb
PDB entry 5jqc coloured by chain, front view.
PDB entry 5jqc coloured by chain, side view.
PDB entry 5jqc coloured by chain, top view.
Source organism: Listeria monocytogenes EGD-e
Entry authors: Chang C, Zhou M, Shatsman S, Anderson WF, Joachimiak A, Center for Structural Genomics of Infectious Diseases (CSGID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186992 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
GW domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 259 amino acids
Theoretical weight: 28.94 KDa
Source organism: Listeria monocytogenes EGD-e
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: Q8Y842 (Residues: 233-491; Coverage: 47%)
Gene name: lmo1076
Sequence domains: GW (Gly-Tryp) dipeptide domain

Ligands and Environments

3 bound ligands:
Ligand GOL 3 x GOL
Ligand SO4 3 x SO4
Ligand PEG 2 x PEG
1 modified residue:
Ligand MSE 3 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 39.468Å b: 89.323Å c: 94.441Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.196 0.252
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'

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