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Crystal structure of the organohalide sensing RdhR-CbdbA1625 transcriptional regulator in the ligand free form

Source organism: Dehalococcoides mccartyi CBDB1
Biochemical function: DNA-binding transcription factor activity
Biological process: regulation of DNA-templated transcription
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF12802
Domain description: MarR family
Occurring in:
  1. HTH marR-type domain-containing protein

InterPro InterPro annotations
IPR000835
Domain description: MarR-type HTH domain
Occurring in:
  1. HTH marR-type domain-containing protein
IPR036390
Domain description: Winged helix DNA-binding domain superfamily
Occurring in:
  1. HTH marR-type domain-containing protein
IPR036388
Domain description: Winged helix-like DNA-binding domain superfamily
Occurring in:
  1. HTH marR-type domain-containing protein

Structure domain

CATH CATH domain
1.10.10.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Arc Repressor Mutant, subunit A
Homology: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain
Occurring in:
  1. HTH marR-type domain-containing protein
The deposited structure of PDB entry 5e1w contains 1 copy of CATH domain 1.10.10.10 (Arc Repressor Mutant, subunit A) in HTH marR-type domain-containing protein. Showing 1 copy in chain A.

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