PDB 5djq structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Reaction catalysed:

4 ferrocytochrome c + O(2) + 8 H(+)(Side 1) = 4 ferricytochrome c + 4 H(2)O(Side 2)

Biochemical function:

metal ion binding

Biological process:

proton transmembrane transport

Cellular component:

cytochrome complex

Sequence domains:

4 more domains

Structure analysis Details

Assembly composition:

hetero tetramer (preferred)

PDBe Complex ID:

PDB-CPX-112925 (preferred)

Entry contents:

4 distinct polypeptide molecules

Macromolecules (4 distinct):

Cbb3-type cytochrome c oxidase subunit CcoN1 Chains: A, D, G, K

Molecule details ›

Chains: A, D, G, K
Length: 474 amino acids
Theoretical weight: 52.83 KDa
Source organism: Stutzerimonas stutzeri
UniProt:

Canonical: D9IA43 (Residues: 1-474; Coverage: 100%)

Gene name: ccoN1
Sequence domains: Cytochrome C and Quinol oxidase polypeptide I
Structure domains: Cytochrome c oxidase-like, subunit I domain

Cytochrome c domain-containing protein Chains: B, E, H, L

Molecule details ›

Chains: B, E, H, L
Length: 203 amino acids
Theoretical weight: 22.84 KDa
Source organism: Stutzerimonas stutzeri
UniProt:

Canonical: D9IA44 (Residues: 1-203; Coverage: 100%)

Gene names: CXK99_03610, ccoO, ccoO1
Sequence domains: Cytochrome C oxidase, mono-heme subunit/FixO
Structure domains:

Cbb3-type cytochrome c oxidase subunit CcoP1 Chains: C, F, I, M

Molecule details ›

Chains: C, F, I, M
Length: 311 amino acids
Theoretical weight: 33.69 KDa
Source organism: Stutzerimonas stutzeri
UniProt:

Canonical: D9IA45 (Residues: 1-311; Coverage: 100%)

Gene name: ccoP1
Sequence domains:

Structure domains:

Putative uncharacterized protein Chains: N, O, P, Q

Molecule details ›

Chains: N, O, P, Q
Length: 36 amino acids
Theoretical weight: 3.96 KDa
Source organism: Stutzerimonas stutzeri ATCC 14405 = CCUG 16156