› 5c5w

X-ray diffraction
1.25Å resolution

1.25 A resolution structure of an RNA 20-mer

Released:
DOI: 10.2210/pdb5c5w/pdb
PDB entry 5c5w coloured by chain, front view.
PDB entry 5c5w coloured by chain, side view.
PDB entry 5c5w coloured by chain, top view.
Source organism: Saccharomyces
Primary publication:
1.25 Å resolution structure of an RNA 20-mer that binds to the TREX2 complex.
Valkov E, Stewart M
Acta Crystallogr F Struct Biol Commun 71 1318-21 (2015)
PMID: 26457524

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196907 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (5'-R(P*CP*CP*UP*GP*AP*GP*UP*UP*CP*AP*AP*UP*UP*CP*UP*AP*GP*CP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 19 nucleotides
Theoretical weight: 6.02 KDa
Source organism: Saccharomyces
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: R32
Unit cell:
a: 39.87Å b: 39.87Å c: 156.87Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.18 0.179 0.188
Expression system: Not provided

Quick links

Citations

2 citation in other articles

The Sac3 TPR-like region in the Saccharomyces cerevisiae TREX-2 complex is more extensive but independent of the CID region.
Aibara et al. (2016)
1 more

2 mentions without citation

1.25 Å resolution structure of an RNA 20-mer that binds to the TREX2 complex.
Valkov et al. (2015)
1 more