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PD-1 binding domain from human PD-L1

X-ray diffraction
1.8Å resolution
PDB entry 5c3t coloured by chain, front view.
PDB entry 5c3t coloured by chain, side view.
PDB entry 5c3t coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Programmed cell death 1 ligand 1
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Multimeric state: monomeric
Accessible surface area: 7075.34 Å2
Buried surface area: 0.0 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-192774

Macromolecules

Programmed cell death 1 ligand 1
Chain: A
Length: 126 amino acids
Theoretical weight: 14.4 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9NZQ7 (Residues: 18-134; Coverage: 43%)
Gene names: B7H1, CD274, PDCD1L1, PDCD1LG1, PDL1
Pfam: Immunoglobulin V-set domain
InterPro:
CATH: Immunoglobulins
Programmed cell death 1 ligand 1 in PDB entry 5c3t, assembly 1, front view.
Programmed cell death 1 ligand 1 in PDB entry 5c3t, assembly 1, side view.
Programmed cell death 1 ligand 1 in PDB entry 5c3t, assembly 1, top view.
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