› 4z04

X-ray diffraction
1.45Å resolution

Crystal structure of a probable lactoylglutathione lyase from Brucella melitensis in complex with glutathione

Released:
DOI: 10.2210/pdb4z04/pdb
PDB 4z04 coloured by chain and viewed from the front.
PDB 4z04 coloured by chain and viewed from the side.
PDB 4z04 coloured by chain and viewed from the top.
Source organism: Brucella abortus 2308
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
VOC domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 131 amino acids
Theoretical weight: 14.47 KDa
Source organism: Brucella abortus 2308
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q2YLQ3 (Residues: 1-123; Coverage: 100%)
Gene name: BAB1_1899
Sequence domains: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Structure domains: 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1

Ligands and Environments

4 bound ligands:
Ligand GSH 1 x GSH
Ligand ZN 1 x ZN
Ligand MRD 1 x MRD
Ligand MPD 1 x MPD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: C2
Unit cell:
a: 82.63Å b: 39.5Å c: 41.7Å
α: 90° β: 116.29° γ: 90°
R-values:
R R work R free
0.135 0.134 0.161
Expression system: Escherichia coli BL21(DE3)

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