› 4yc5

X-ray diffraction
1.76Å resolution

Beta1 synthetic solenoid protein

Released:
DOI: 10.2210/pdb4yc5/pdb
PDB 4yc5 coloured by chain and viewed from the front.
PDB 4yc5 coloured by chain and viewed from the side.
PDB 4yc5 coloured by chain and viewed from the top.
Source organism: synthetic construct
Primary publication:
Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension.
MacDonald JT, Kabasakal BV, Godding D, Kraatz S, Henderson L, Barber J, Freemont PS, Murray JW
Proc Natl Acad Sci U S A 113 10346-51 (2016)
PMID: 27573845

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
beta1 Chain: A
Molecule details ›
Chain: A
Length: 235 amino acids
Theoretical weight: 24.68 KDa
Source organism: synthetic construct
Expression system: Escherichia coli
Structure domains: E3 ubiquitin-protein ligase SopA

Ligands and Environments

1 bound ligand:
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P4122
Unit cell:
a: 64.57Å b: 64.57Å c: 160.4Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.159 0.158 0.184
Expression system: Escherichia coli

Quick links

Citations

8 review citations

Step-by-step design of proteins for small molecule interaction: A review on recent milestones.
Pereira et al. (2021)
7 more