Structure analysis

Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-((1S)-2-((4- carbamimidoylphenyl)methylamino)-1-methyl-2-oxo-ethyl)-N-methyl-3- phenyl-propanamide ethane

X-ray diffraction
1.65Å resolution
Source organisms:
Assembly composition:
hetero trimer (preferred)
Entry contents: 3 distinct polypeptide molecules

Assemblies

Assembly 1 (preferred)
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Multimeric state: hetero trimer
Accessible surface area: 12655.88 Å2
Buried surface area: 4007.98 Å2
Dissociation area: 589.56 Å2
Dissociation energy (ΔGdiss): 0.18 kcal/mol
Dissociation entropy (TΔSdiss): 7.63 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-133076

Macromolecules

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Chain: I
Length: 12 amino acids
Theoretical weight: 1.55 KDa
Source organism: Hirudo medicinalis
Expression system: Not provided
UniProt:
  • Canonical: P09945 (Residues: 61-72; Coverage: 19%)

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Chain: L
Length: 29 amino acids
Theoretical weight: 3.43 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P00734 (Residues: 333-361; Coverage: 5%)
Gene name: F2
Pfam: Thrombin light chain
InterPro:

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