› 4uas

X-ray diffraction
1.2Å resolution

Crystal structure of CbbY from Rhodobacter sphaeroides in complex with phosphate

Released:
DOI: 10.2210/pdb4uas/pdb
PDB entry 4uas coloured by chain, front view.
PDB entry 4uas coloured by chain, side view.
PDB entry 4uas coloured by chain, top view.
Source organism: Cereibacter sphaeroides
Primary publication:
Degradation of potent Rubisco inhibitor by selective sugar phosphatase.
Bracher A, Sharma A, Starling-Windhof A, Hartl FU, Hayer-Hartl M
Nat Plants 1 14002 (2015)
PMID: 27246049

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-161171 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Protein CbbY Chains: A, B
Molecule details ›
Chains: A, B
Length: 230 amino acids
Theoretical weight: 25.15 KDa
Source organism: Cereibacter sphaeroides
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P95649 (Residues: 1-230; Coverage: 100%)
Gene name: cbbY
Sequence domains: haloacid dehalogenase-like hydrolase
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand PO4 2 x PO4
Ligand MG 2 x MG
Ligand CL 2 x CL
Ligand MES 2 x MES
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: P212121
Unit cell:
a: 51.805Å b: 70.885Å c: 125.433Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.137 0.135 0.173
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

7 review citations

Biogenesis and Metabolic Maintenance of Rubisco.
Bracher et al. (2017)
6 more

1 mention without citation

Actinide-Pnictide (An-Pn) Bonds Spanning Non-Metal, Metalloid, and Metal Combinations (An=U, Th; Pn=P, As, Sb, Bi).
Rookes et al. (2018)