› 4qs6

X-ray diffraction
1.76Å resolution

CRYSTAL STRUCTURE of 5-CARBOXYVANILLATE DECARBOXYLASE LIGW2 FROM NOVOSPHINGOBIUM AROMATICIVORANS DSM 12444 (TARGET EFI-505250) WITH BOUND 4-HYDROXY-3-METHOXY-5-NITROBENZOIC ACID, NO METAL, THE D314N MUTANT

Released:
DOI: 10.2210/pdb4qs6/pdb
PDB 4qs6 coloured by chain and viewed from the front.
PDB 4qs6 coloured by chain and viewed from the side.
PDB 4qs6 coloured by chain and viewed from the top.
Source organism: Novosphingobium aromaticivorans DSM 12444
Entry authors: Patskovsky Y, Vladimirova A, Toro R, Bhosle R, Gerlt JA, Raushel FM, Almo SC

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Amidohydrolase-related domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 373 amino acids
Theoretical weight: 42.46 KDa
Source organism: Novosphingobium aromaticivorans DSM 12444
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q2GA79 (Residues: 1-351; Coverage: 100%)
Gene name: Saro_0799
Sequence domains: Amidohydrolase
Structure domains: Metal-dependent hydrolases

Ligands and Environments

3 bound ligands:
Ligand GOL 3 x GOL
Ligand CL 2 x CL
Ligand 1DF 2 x 1DF
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P212121
Unit cell:
a: 60.422Å b: 85.396Å c: 141.616Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.163 0.162 0.205
Expression system: Escherichia coli BL21(DE3)

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