› 4qey

X-ray diffraction
2.52Å resolution

Crystal structure of a DUF4425 family protein (BACOVA_05332) from Bacteroides ovatus ATCC 8483 at 2.52 A resolution

Released:
DOI: 10.2210/pdb4qey/pdb
PDB 4qey coloured by chain and viewed from the front.
PDB 4qey coloured by chain and viewed from the side.
PDB 4qey coloured by chain and viewed from the top.
Source organism: Bacteroides ovatus ATCC 8483
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized protein Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 132 amino acids
Theoretical weight: 14.28 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli
UniProt:
  • Canonical: A7M5D7 (Residues: 24-155; Coverage: 85%)
Gene name: BACOVA_05332
Sequence domains: PLAT/LH2 and C2-like Ca2+-binding lipoprotein
Structure domains: Lipoxygenase-1

Ligands and Environments

3 bound ligands:
Ligand PEG 6 x PEG
Ligand EDO 28 x EDO
Ligand PGE 1 x PGE
1 modified residue:
Ligand MSE 20 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21
Unit cell:
a: 90.59Å b: 101.34Å c: 91.42Å
α: 90° β: 107.91° γ: 90°
R-values:
R R work R free
0.198 0.196 0.221
Expression system: Escherichia coli

Quick links