4oug

X-ray diffraction
2.46Å resolution

Crystal structure of the ternary complex of camel peptidoglycan recognition protein, PGRP-S with lipopolysaccharide and palmitic acid at 2.46 A resolution

Released:
Source organism: Camelus dromedarius
Entry authors: Yamini S, Sharma P, Yadav SP, Sinha M, Kaur P, Sharma S, Singh TP

Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peptidoglycan recognition protein 1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 171 amino acids
Theoretical weight: 19.01 KDa
Source organism: Camelus dromedarius
UniProt:
  • Canonical: Q9GK12 (Residues: 23-193; Coverage: 99%)
Gene names: PGLYRP, PGLYRP1, PGRP
Sequence domains: N-acetylmuramoyl-L-alanine amidase
Structure domains: Peptidoglycan recognition protein-like

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Spacegroup: I222
Unit cell:
a: 88.4Å b: 101.439Å c: 162.18Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.222 0.222 0.248