Assemblies
Assembly Name:
Alpha-ketoglutarate-dependent dioxygenase AlkB and DNA
Multimeric state:
hetero trimer
Accessible surface area:
12528.48 Å2
Buried surface area:
4308.95 Å2
Dissociation area:
1,695.02
Å2
Dissociation energy (ΔGdiss):
4.22
kcal/mol
Dissociation entropy (TΔSdiss):
20.3
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-117875
Macromolecules
Chain: A
Length: 205 amino acids
Theoretical weight: 22.81 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
InterPro:
Length: 205 amino acids
Theoretical weight: 22.81 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
- Canonical: P05050 (Residues: 12-216; Coverage: 95%)
InterPro:
- Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
- Alpha-ketoglutarate-dependent dioxygenase AlkB-like
- Alkylated DNA repair protein AlkB
- Oxoglutarate/iron-dependent dioxygenase
Name:
5'-D(*TP*AP*GP*GP*TP*AP*AP*(6MA)P*AP*CP*CP*GP*T)-3'
Representative chains: B
Source organism: Escherichia coli [562]
Expression system: Not provided
Length: 13 nucleotides
Theoretical weight: 4.07 KDa
Representative chains: B
Source organism: Escherichia coli [562]
Expression system: Not provided
Length: 13 nucleotides
Theoretical weight: 4.07 KDa
Name:
5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'
Representative chains: C
Source organism: Escherichia coli [562]
Expression system: Not provided
Length: 13 nucleotides
Theoretical weight: 3.95 KDa
Representative chains: C
Source organism: Escherichia coli [562]
Expression system: Not provided
Length: 13 nucleotides
Theoretical weight: 3.95 KDa