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ClpB NBD2 R621Q from T. thermophilus in complex with AMPPCP

Source organism: Thermus thermophilus HB8
Biochemical function: ATP hydrolysis activity
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF10431
Domain description: C-terminal, D2-small domain, of ClpB protein
Occurring in:
  1. Chaperone protein ClpB
The deposited structure of PDB entry 4lj9 contains 1 copy of Pfam domain PF10431 (C-terminal, D2-small domain, of ClpB protein ) in Chaperone protein ClpB. Showing 1 copy in chain A.

PF07724
Domain description: AAA domain (Cdc48 subfamily)
Occurring in:
  1. Chaperone protein ClpB
The deposited structure of PDB entry 4lj9 contains 1 copy of Pfam domain PF07724 (AAA domain (Cdc48 subfamily)) in Chaperone protein ClpB. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR001270
Domain description: ClpA/B family
Occurring in:
  1. Chaperone protein ClpB
IPR019489
Domain description: Clp ATPase, C-terminal
Occurring in:
  1. Chaperone protein ClpB
IPR027417
Domain description: P-loop containing nucleoside triphosphate hydrolase
Occurring in:
  1. Chaperone protein ClpB
IPR003593
Domain description: AAA+ ATPase domain
Occurring in:
  1. Chaperone protein ClpB
IPR003959
Domain description: ATPase, AAA-type, core
Occurring in:
  1. Chaperone protein ClpB

Structure domains

CATH CATH domains
1.10.8.60
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Helicase, Ruva Protein; domain 3
Homology: Helicase, Ruva Protein; domain 3
Occurring in:
  1. Chaperone protein ClpB
The deposited structure of PDB entry 4lj9 contains 1 copy of CATH domain 1.10.8.60 (Helicase, Ruva Protein; domain 3) in Chaperone protein ClpB. Showing 1 copy in chain A.
3.40.50.300
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Rossmann fold
Homology: P-loop containing nucleotide triphosphate hydrolases
Occurring in:
  1. Chaperone protein ClpB
The deposited structure of PDB entry 4lj9 contains 1 copy of CATH domain 3.40.50.300 (Rossmann fold) in Chaperone protein ClpB. Showing 1 copy in chain A.

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