X-ray diffraction
1.48Å resolution

Crystal structure of beta'-COP/yWbp1 complex

Source organism: Saccharomyces cerevisiae
Primary publication:
Rules for the recognition of dilysine retrieval motifs by coatomer.
EMBO J 32 926-37 (2013)
PMID: 23481256

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Coatomer subunit beta' Chains: A, B
Molecule details ›
Chains: A, B
Length: 301 amino acids
Theoretical weight: 34.29 KDa
Source organism: Saccharomyces cerevisiae
  • Canonical: P41811 (Residues: 1-301; Coverage: 34%)
Gene names: G2827, SEC27, YGL137W
Sequence domains: WD domain, G-beta repeat
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 Chains: C, D
Molecule details ›
Chains: C, D
Length: 6 amino acids
Theoretical weight: 740 Da
Source organism: Saccharomyces cerevisiae
Expression system: Not provided
  • Canonical: P33767 (Residues: 425-430; Coverage: 2%)
Gene names: WBP1, YEL002C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P21
Unit cell:
a: 73.976Å b: 50.648Å c: 83.576Å
α: 90° β: 99.459° γ: 90°
R R work R free
0.163 0.163 0.188
Expression system: Not provided