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Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004 in space group P21

X-ray diffraction
1.55Å resolution
PDB entry 4hps coloured by chain, front view.
PDB entry 4hps coloured by chain, side view.
PDB entry 4hps coloured by chain, top view.
Source organism: Xenorhabdus bovienii SS-2004
Assembly composition:
homo tetramer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Pyrrolidone-carboxylate peptidase
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Multimeric state: homo tetramer
Accessible surface area: 31035.15 Å2
Buried surface area: 7632.5 Å2
Dissociation area: 1,453.2 Å2
Dissociation energy (ΔGdiss): 18.55 kcal/mol
Dissociation entropy (TΔSdiss): 13.94 kcal/mol
Symmetry number: 4
PDBe Complex ID: PDB-CPX-112559

Macromolecules

Pyrrolidone-carboxylate peptidase
Chains: A, B, C, D
Length: 228 amino acids
Theoretical weight: 24.75 KDa
Source organism: Xenorhabdus bovienii SS-2004
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: D3V0W1 (Residues: 1-206; Coverage: 96%)
Gene names: XBJ1_1667, pcp
Pfam: Pyroglutamyl peptidase
InterPro:
CATH: Peptidase C15, pyroglutamyl peptidase I-like
Pyrrolidone-carboxylate peptidase in PDB entry 4hps, assembly 1, front view.
Pyrrolidone-carboxylate peptidase in PDB entry 4hps, assembly 1, side view.
Pyrrolidone-carboxylate peptidase in PDB entry 4hps, assembly 1, top view.
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