› 4ga0

X-ray diffraction
1.15Å resolution

Structure of the N-terminal domain of Nup358

Released:
DOI: 10.2210/pdb4ga0/pdb
PDB entry 4ga0 coloured by chain, front view.
PDB entry 4ga0 coloured by chain, side view.
PDB entry 4ga0 coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystal structure of the N-terminal domain of Nup358/RanBP2.
Kassube SA, Stuwe T, Lin DH, Antonuk CD, Napetschnig J, Blobel G, Hoelz A
J Mol Biol 423 752-65 (2012)
PMID: 22959972

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-156035 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
E3 SUMO-protein ligase RanBP2 Chain: A
Molecule details ›
Chain: A
Length: 150 amino acids
Theoretical weight: 17.35 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P49792 (Residues: 1-145; Coverage: 5%)
Gene names: NUP358, RANBP2
Structure domains: Tetratricopeptide repeat domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P21212
Unit cell:
a: 59.219Å b: 82.768Å c: 29.543Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.216 0.214 0.239
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

8 review citations

The Structure of the Nuclear Pore Complex (An Update).
Lin et al. (2019)
7 more

8 mentions without citation

Crystal structure of the N-terminal domain of Nup358/RanBP2.
Kassube et al. (2012)
7 more