› 4e6f

X-ray diffraction
1.49Å resolution

Crystal structure of a DUF4468 family protein (BACOVA_04320) from Bacteroides ovatus ATCC 8483 at 1.49 A resolution

Released:
DOI: 10.2210/pdb4e6f/pdb
PDB entry 4e6f coloured by chain, front view.
PDB entry 4e6f coloured by chain, side view.
PDB entry 4e6f coloured by chain, top view.
Source organism: Bacteroides ovatus ATCC 8483
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108351 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF4468 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 181 amino acids
Theoretical weight: 20.93 KDa
Source organism: Bacteroides ovatus ATCC 8483
Expression system: Escherichia coli
UniProt:
  • Canonical: A7M2I6 (Residues: 25-204; Coverage: 50%)
Gene name: BACOVA_04320
Sequence domains: Domain of unknown function (DUF4468) with TBP-like fold
Structure domains: Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4

Ligands and Environments

2 bound ligands:
Ligand NO3 7 x NO3
Ligand EDO 3 x EDO
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21
Unit cell:
a: 49.237Å b: 89.078Å c: 52.586Å
α: 90° β: 105.49° γ: 90°
R-values:
R R work R free
0.161 0.16 0.18
Expression system: Escherichia coli

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