PDBe 4dfh

X-ray diffraction
1.85Å resolution

Crystal structure of cell adhesion molecule nectin-2/CD112 variable domain


Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Nectin-2 Chains: A, B
Molecule details ›
Chains: A, B
Length: 128 amino acids
Theoretical weight: 13.95 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
  • Canonical: Q92692 (Residues: 32-158; Coverage: 25%)
Gene names: HVEB, NECTIN2, PRR2, PVRL2
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P21
Unit cell:
a: 52.673Å b: 43.85Å c: 56.075Å
α: 90° β: 118.24° γ: 90°
R R work R free
0.194 0.171 0.194
Expression system: Escherichia coli