4cz0

X-ray diffraction
3.2Å resolution

Structure of the A_mallard_Sweden_51_2002 H10 Avian Haemmaglutinin in complex with avian receptor analog Su-3SLN

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Hemagglutinin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 318 amino acids
Theoretical weight: 34.65 KDa
Source organism: Influenza A virus (A/mallard/Sweden/51/2002(H10N2))
UniProt:
  • Canonical: E0YNJ7 (Residues: 18-335; Coverage: 57%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 172 amino acids
Theoretical weight: 19.77 KDa
Source organism: Influenza A virus (A/mallard/Sweden/51/2002(H10N2))
UniProt:
  • Canonical: E0YNJ7 (Residues: 341-512; Coverage: 31%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NGS, GAL, SIA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P21
Unit cell:
a: 69.113Å b: 216.085Å c: 81.486Å
α: 90° β: 105.23° γ: 90°
R-values:
R R work R free
0.266 0.264 0.303