X-ray diffraction
2.96Å resolution

Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology


Function and Biology Details

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Entry contents:
1 distinct polypeptide molecule
AbgT putative transporter family Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 492 amino acids
Theoretical weight: 51.6 KDa
Source organism: Alcanivorax borkumensis SK2
Expression system: Escherichia coli
  • Canonical: Q0VR69 (Residues: 1-492; Coverage: 100%)
Gene names: ABO_0881, ydaH
Sequence domains: AbgT putative transporter family

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P21
Unit cell:
a: 94.145Å b: 200.984Å c: 101.493Å
α: 90° β: 91.82° γ: 90°
R R work R free
0.209 0.206 0.25
Expression system: Escherichia coli