4ds0

X-ray diffraction
1.56Å resolution

Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Outer capsid protein VP4 Chain: A
Molecule details ›
Chain: A
Length: 163 amino acids
Theoretical weight: 18.57 KDa
Source organism: Rotavirus sp.
Expression system: Escherichia coli
UniProt:
  • Canonical: Q86169 (Residues: 64-224; Coverage: 21%)
Structure domains: Jelly Rolls

Ligands and Environments


No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E SUPERBRIGHT
Spacegroup: P21
Unit cell:
a: 43.75Å b: 35.54Å c: 44.06Å
α: 90° β: 94.85° γ: 90°
R-values:
R R work R free
0.158 0.156 0.187
Expression system: Escherichia coli