4dpv

X-ray diffraction
2.9Å resolution

PARVOVIRUS/DNA COMPLEX

Released:
Source organism: Canine parvovirus
Primary publication:
Canine parvovirus capsid structure, analyzed at 2.9 A resolution.
J. Mol. Biol. 264 497-520 (1996)
PMID: 8969301

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assemblies composition:
hetero 120-mer (preferred)
hetero dimer
hetero decamer
hetero 12-mer
Entry contents:
1 distinct polypeptide molecule
1 distinct DNA molecule
Macromolecules (2 distinct):
Capsid protein VP1 Chain: Z
Molecule details ›
Chain: Z
Length: 584 amino acids
Theoretical weight: 64.71 KDa
Source organism: Canine parvovirus
UniProt:
  • Canonical: P17455 (Residues: 144-727; Coverage: 80%)
Sequence domains: Parvovirus coat protein VP2
Structure domains: Parvovirus coat protein VP1/VP2
DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3') Chain: N
Molecule details ›
Chain: N
Length: 11 nucleotides
Theoretical weight: 3.28 KDa
Source organism: Canine parvovirus
Expression system: Not provided

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P21
Unit cell:
a: 263.21Å b: 349.01Å c: 267.32Å
α: 90° β: 90.82° γ: 90°
R-values:
R R work R free
not available not available 0.283
Expression system: Not provided