› 484d

Solution NMR

SOLUTION STRUCTURE OF HIV-1 REV PEPTIDE-RNA APTAMER COMPLEX

Released:
DOI: 10.2210/pdb484d/pdb
PDB entry 484d coloured by chain, ensemble of 22 models, front view.
PDB entry 484d coloured by chain, ensemble of 22 models, side view.
PDB entry 484d coloured by chain, ensemble of 22 models, top view.
Source organism: Human immunodeficiency virus 1
Primary publication:
RNA architecture dictates the conformations of a bound peptide.
Ye X, Gorin A, Frederick R, Hu W, Majumdar A, Xu W, McLendon G, Ellington A, Patel DJ
Chem Biol 6 657-69 (1999)
PMID: 10467126

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Structure domain:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-181247 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Protein Rev Chain: A
Molecule details ›
Chain: A
Length: 17 amino acids
Theoretical weight: 2.45 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Not provided
UniProt:
  • Canonical: Q79994 (Residues: 34-50; Coverage: 29%)
Gene names: rev, rev1
RNA APTAMER Chain: B
Molecule details ›
Chain: B
Length: 27 nucleotides
Theoretical weight: 8.7 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DIHEDRAL ANGLE MD
Expression system: Not provided

Quick links

Citations

9 review citations

The new (dis)order in RNA regulation.
Järvelin et al. (2016)
8 more

5 mentions without citation

Deep structural insights into RNA-binding disordered protein regions.
Zeke et al. (2022)
4 more