› 3wje

X-ray diffraction
1.7Å resolution

Crystal structure of mutant nitrobindin M75W/H76L/Q96C/M148L/H158L (NB6) from Arabidopsis thaliana

Released:
DOI: 10.2210/pdb3wje/pdb
PDB entry 3wje coloured by chain, front view.
PDB entry 3wje coloured by chain, side view.
PDB entry 3wje coloured by chain, top view.
Source organism: Arabidopsis thaliana
Primary publication:
A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity
Fukumoto K, Onoda A, Mizohata E, Bocola M, Inoue T, Schwaneberg U, Hayashi T
ChemCatChem (2014)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130275 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peroxynitrite isomerase Rv2717c Chains: A, B
Molecule details ›
Chains: A, B
Length: 174 amino acids
Theoretical weight: 19.51 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: O64527 (Residues: 2-166; Coverage: 99%)
Gene names: At1g79260, YUP8H12R.14
Sequence domains: THAP4-like, heme-binding beta-barrel domain
Structure domains: Lipocalin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL44XU
Spacegroup: C2
Unit cell:
a: 88.555Å b: 72.541Å c: 59.795Å
α: 90° β: 111.63° γ: 90°
R-values:
R R work R free
0.18 0.178 0.216
Expression system: Escherichia coli

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