› 3psn

X-ray diffraction
2.4Å resolution

Crystal structure of mouse VPS29 complexed with Mn2+

Released:
DOI: 10.2210/pdb3psn/pdb
PDB entry 3psn coloured by chain, front view.
PDB entry 3psn coloured by chain, side view.
PDB entry 3psn coloured by chain, top view.
Source organism: Mus musculus
Entry authors: Swarbrick J, Shaw D, Chhabra S, Ghai R, Valkov E, Norwood S, Collins B

Function and Biology Details

Reaction catalysed: 
O-phospho-L(or D)-serine + H(2)O = L(or D)-serine + phosphate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-193065 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Vacuolar protein sorting-associated protein 29 Chains: A, B
Molecule details ›
Chains: A, B
Length: 192 amino acids
Theoretical weight: 21.63 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9QZ88 (Residues: 1-182; Coverage: 100%)
Gene name: Vps29
Sequence domains: Calcineurin-like phosphoesterase superfamily domain
Structure domains: Purple Acid Phosphatase; chain A, domain 2

Ligands and Environments

1 bound ligand:
Ligand MN 6 x MN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Spacegroup: P21
Unit cell:
a: 42.437Å b: 69.122Å c: 69.024Å
α: 90° β: 105.44° γ: 90°
R-values:
R R work R free
0.197 0.195 0.243
Expression system: Escherichia coli

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