Function and Biology

Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16

Source organism: Methanocorpusculum labreanum Z
Biochemical function: metallopeptidase activity
Biological process: proteolysis
Cellular component: not assigned

GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF07998
Domain description: Peptidase family M54
Occurring in:
  1. Peptidase, zinc-dependent
1 copy of Pfam domain PF07998 (Peptidase family M54) in Peptidase, zinc-dependent in PDB 3lmc.

InterPro InterPro annotations
IPR012962
Domain description: Peptidase M54, archaemetzincin
Occurring in:
  1. Peptidase, zinc-dependent
IPR012091
Domain description: Peptidase M54, archaemetzincin, archaeal/bacterial
Occurring in:
  1. Peptidase, zinc-dependent
IPR024079
Domain description: Metallopeptidase, catalytic domain superfamily
Occurring in:
  1. Peptidase, zinc-dependent

Structure domain

CATH CATH domain
3.40.390.10
Class: Alpha Beta
Architecture: 3-Layer(aba) Sandwich
Topology: Collagenase (Catalytic Domain)
Homology: Collagenase (Catalytic Domain)
Occurring in:
  1. Peptidase, zinc-dependent
1 copy of CATH domain 3.40.390.10 (Collagenase (Catalytic Domain)) in Peptidase, zinc-dependent in PDB 3lmc.