› 3llx

X-ray diffraction
1.5Å resolution

Crystal structure of an ala racemase-like protein (il1761) from idiomarina loihiensis at 1.50 A resolution

Released:
DOI: 10.2210/pdb3llx/pdb
PDB entry 3llx coloured by chain, front view.
PDB entry 3llx coloured by chain, side view.
PDB entry 3llx coloured by chain, top view.
Source organism: Idiomarina loihiensis L2TR
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177769 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
D-serine dehydratase-like domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 376 amino acids
Theoretical weight: 41.51 KDa
Source organism: Idiomarina loihiensis L2TR
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5QX87 (Residues: 1-375; Coverage: 100%)
Gene name: IL1761
Sequence domains:
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand ZN 1 x ZN
Ligand CL 6 x CL
Ligand TRS 1 x TRS
Ligand EDO 9 x EDO
2 modified residues:
Ligand MSE 8 x MSE
Ligand LLP 1 x LLP

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: I422
Unit cell:
a: 109.557Å b: 109.557Å c: 173.321Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.142 0.141 0.158
Expression system: Escherichia coli

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