› › Function and Biology

Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model

Source organisms:
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribosome

Quick links

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Large ribosomal subunit protein uL30
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Large ribosomal subunit protein uL30. Showing 1 copy in chain S [auth Y].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Large ribosomal subunit protein uL29
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Large ribosomal subunit protein uL29. Showing 1 copy in chain R [auth X].

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23. Showing 1 copy in chain O [auth T].

PF01196
Domain description: Ribosomal protein L17
Occurring in:
  1. Large ribosomal subunit protein bL17m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF01196 (Ribosomal protein L17) in Large ribosomal subunit protein bL17m. Showing 1 copy in chain K [auth S].

PF00829
Domain description: Ribosomal prokaryotic L21 protein
Occurring in:
  1. Large ribosomal subunit protein bL21
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00829 (Ribosomal prokaryotic L21 protein) in Large ribosomal subunit protein bL21. Showing 1 copy in chain M [auth R].

PF00453
Domain description: Ribosomal protein L20
Occurring in:
  1. Large ribosomal subunit protein bL20
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00453 (Ribosomal protein L20) in Large ribosomal subunit protein bL20. Showing 1 copy in chain L [auth Q].

PF00471
Domain description: Ribosomal protein L33
Occurring in:
  1. Large ribosomal subunit protein bL33m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00471 (Ribosomal protein L33) in Large ribosomal subunit protein bL33m. Showing 1 copy in chain T [auth P].

PF01016
Domain description: Ribosomal L27 protein
Occurring in:
  1. Large ribosomal subunit protein bL27m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF01016 (Ribosomal L27 protein) in Large ribosomal subunit protein bL27m. Showing 1 copy in chain Q [auth O].

PF17136
Domain description: Ribosomal proteins 50S L24/mitochondrial 39S L24
Occurring in:
  1. Large ribosomal subunit protein uL24m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF17136 (Ribosomal proteins 50S L24/mitochondrial 39S L24) in Large ribosomal subunit protein uL24m. Showing 1 copy in chain P [auth N].

PF00467
Domain description: KOW motif
Occurring in:
  1. Large ribosomal subunit protein uL24m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein uL24m. Showing 1 copy in chain P [auth N].

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Large ribosomal subunit protein uL22m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Large ribosomal subunit protein uL22m. Showing 1 copy in chain N [auth M].

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15. Showing 1 copy in chain I [auth L].

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Large ribosomal subunit protein uL14
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Large ribosomal subunit protein uL14. Showing 1 copy in chain H [auth K].

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Large ribosomal subunit protein uL13
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Large ribosomal subunit protein uL13. Showing 1 copy in chain G [auth J].

PF00252
Domain description: Ribosomal protein L16p/L10e
Occurring in:
  1. Large ribosomal subunit protein uL16m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00252 (Ribosomal protein L16p/L10e) in Large ribosomal subunit protein uL16m. Showing 1 copy in chain J [auth I].

PF01281
Domain description: Ribosomal protein L9, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein bL9
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF01281 (Ribosomal protein L9, N-terminal domain) in Large ribosomal subunit protein bL9. Showing 1 copy in chain E [auth H].

PF00298
Domain description: Ribosomal protein L11, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL11m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00298 (Ribosomal protein L11, RNA binding domain) in Large ribosomal subunit protein uL11m. Showing 1 copy in chain F [auth G].

PF03946
Domain description: Ribosomal protein L11, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF03946 (Ribosomal protein L11, N-terminal domain) in Large ribosomal subunit protein uL11m. Showing 1 copy in chain F [auth G].

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4m. Showing 1 copy in chain D.

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Large ribosomal subunit protein uL3
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Large ribosomal subunit protein uL3. Showing 1 copy in chain C.

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2m. Showing 1 copy in chain B.

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2m
The deposited structure of PDB entry 3iy9 contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2m. Showing 1 copy in chain B.

Rfam RNA family (Rfam)
RF02546
Domain description: Trypanosomatid mitochondrial large subunit ribosomal RNA
Occurring in:
  1. Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit
The deposited structure of PDB entry 3iy9 contains 1 copy of Rfam domain RF02546 (Trypanosomatid mitochondrial large subunit ribosomal RNA) in Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR005813
Domain description: Large ribosomal subunit protein bL20
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR005996
Domain description: Large ribosomal subunit protein uL30, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR001684
Domain description: Large ribosomal subunit protein bL27
Occurring in:
  1. Large ribosomal subunit protein bL27m
IPR000114
Domain description: Large ribosomal subunit protein uL16, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL16m
IPR000911
Domain description: Ribosomal protein uL11
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR000456
Domain description: Large ribosomal subunit protein bL17
Occurring in:
  1. Large ribosomal subunit protein bL17m
IPR019927
Domain description: Large ribosomal subunit protein uL3, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR036373
Domain description: Large ribosomal subunit protein bL17 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL17m
IPR001787
Domain description: Large ribosomal subunit protein bL21
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR035566
Domain description: Ribosomal protein bL20, C-terminal
Occurring in:
  1. Large ribosomal subunit protein bL20
IPR001705
Domain description: Large ribosomal subunit protein bL33
Occurring in:
  1. Large ribosomal subunit protein bL33m
IPR003256
Domain description: Large ribosomal subunit protein uL24
Occurring in:
  1. Large ribosomal subunit protein uL24m
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL22m
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. Large ribosomal subunit protein uL22m
IPR005749
Domain description: Large ribosomal subunit protein uL15, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR036920
Domain description: Large ribosomal subunit protein uL16 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL16m
IPR020070
Domain description: Large ribosomal subunit protein bL9, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR036769
Domain description: Large ribosomal subunit protein uL11, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4m
IPR013005
Domain description: Large ribosomal subunit protein uL4-like
Occurring in:
  1. Large ribosomal subunit protein uL4m
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL2m
  2. Large ribosomal subunit protein uL24m
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2m
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein uL2m
  2. Large ribosomal subunit protein uL24m
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2m
IPR018038
Domain description: Large ribosomal subunit protein uL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30
IPR018254
Domain description: Large ribosomal subunit protein uL29, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL29
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR018258
Domain description: Large ribosomal subunit protein bL21, conserved site
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR036164
Domain description: Large ribosomal subunit protein bL21-like superfamily
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR028909
Domain description: Large ribosomal subunit protein bL21-like
Occurring in:
  1. Large ribosomal subunit protein bL21
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein bL33m
IPR038584
Domain description: Large ribosomal subunit protein bL33 superfamily
Occurring in:
  1. Large ribosomal subunit protein bL33m
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. Large ribosomal subunit protein uL24m
IPR005825
Domain description: Large ribosomal subunit protein uL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL24m
IPR005824
Domain description: KOW
Occurring in:
  1. Large ribosomal subunit protein uL24m
IPR047867
Domain description: Large ribosomal subunit protein uL22, bacterial/organelle-type
Occurring in:
  1. Large ribosomal subunit protein uL22m
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR019972
Domain description: Large ribosomal subunit protein uL14, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR005745
Domain description: Large ribosomal subunit protein uL14, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. Large ribosomal subunit protein uL14
IPR023563
Domain description: Large ribosomal subunit protein uL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR005823
Domain description: Large ribosomal subunit protein uL13, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL13
IPR016180
Domain description: Large ribosomal subunit protein uL16 domain
Occurring in:
  1. Large ribosomal subunit protein uL16m
IPR047873
Domain description: Large ribosomal subunit protein uL16
Occurring in:
  1. Large ribosomal subunit protein uL16m
IPR036935
Domain description: Large ribosomal subunit protein bL9, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020594
Domain description: Large ribosomal subunit protein bL9, bacteria/chloroplast
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR009027
Domain description: Large ribosomal subunit protein bL9/RNase H1, N-terminal
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR000244
Domain description: Large ribosomal subunit protein bL9
Occurring in:
  1. Large ribosomal subunit protein bL9
IPR020783
Domain description: Large ribosomal subunit protein uL11, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR020784
Domain description: Large ribosomal subunit protein uL11, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR036796
Domain description: Large ribosomal subunit protein uL11, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR006519
Domain description: Large ribosomal subunit protein uL11, bacterial-type
Occurring in:
  1. Large ribosomal subunit protein uL11m
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4m
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2m
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2m

Quick links