› 3gg9

X-ray diffraction
1.9Å resolution

CRYSTAL STRUCTURE OF putative D-3-phosphoglycerate dehydrogenase oxidoreductase from Ralstonia solanacearum

Released:
DOI: 10.2210/pdb3gg9/pdb
PDB entry 3gg9 coloured by chain, front view.
PDB entry 3gg9 coloured by chain, side view.
PDB entry 3gg9 coloured by chain, top view.
Source organism: Ralstonia solanacearum
Entry authors: Patskovsky Y, Ramagopal U, Toro R, Morano C, Freeman J, Chang S, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Reaction catalysed: 
3-phospho-D-glycerate + NAD(+) = 3-phosphonooxypyruvate + NADH
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186927 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
D-3-phosphoglycerate dehydrogenase oxidoreductase protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 352 amino acids
Theoretical weight: 38.76 KDa
Source organism: Ralstonia solanacearum
Expression system: Not provided
UniProt:
  • Canonical: Q8Y3G4 (Residues: 10-353; Coverage: 98%)
Gene names: RSc0016, serA
Sequence domains:
Structure domains: NAD(P)-binding Rossmann-like Domain

Ligands and Environments

3 bound ligands:
Ligand SO4 11 x SO4
Ligand GOL 6 x GOL
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P21
Unit cell:
a: 92.034Å b: 97.625Å c: 97.808Å
α: 90° β: 114.96° γ: 90°
R-values:
R R work R free
0.201 0.199 0.261
Expression system: Not provided

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