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Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme

Source organisms:
Biochemical function: RNA binding
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein family (Pfam)
PF00076
Domain description: RNA recognition motif
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
The deposited structure of PDB entry 3g8s contains 4 copies of Pfam domain PF00076 (RNA recognition motif) in U1 small nuclear ribonucleoprotein A. Showing 1 copy in chain D [auth B].

Rfam RNA family (Rfam)
RF00234
Domain description: glmS glucosamine-6-phosphate activated ribozyme
Occurring in:
  1. GLMS RIBOZYME
The deposited structure of PDB entry 3g8s contains 4 copies of Rfam domain RF00234 (glmS glucosamine-6-phosphate activated ribozyme) in GLMS RIBOZYME. Showing 1 copy in chain C [auth P].

InterPro InterPro annotations
IPR000504
Domain description: RNA recognition motif domain
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR045164
Domain description: RNA-binding region-containing protein RBM41/RNPC3
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR034407
Domain description: U1 small nuclear ribonucleoprotein A, RNA recognition motif 1
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR035979
Domain description: RNA-binding domain superfamily
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. U1 small nuclear ribonucleoprotein A

Structure domain

CATH CATH domain
3.30.70.330
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Alpha-Beta Plaits
Homology: Alpha-Beta Plaits
Occurring in:
  1. U1 small nuclear ribonucleoprotein A
The deposited structure of PDB entry 3g8s contains 4 copies of CATH domain 3.30.70.330 (Alpha-Beta Plaits) in U1 small nuclear ribonucleoprotein A. Showing 1 copy in chain D [auth B].

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