› 3es5

X-ray diffraction
3.3Å resolution

Crystal Structure of Partitivirus (PsV-F)

Released:
DOI: 10.2210/pdb3es5/pdb
PDB entry 3es5 coloured by chain, front view.
PDB entry 3es5 coloured by chain, side view.
PDB entry 3es5 coloured by chain, top view.
Source organism: Penicillium stoloniferum virus F
Primary publication:
Atomic structure reveals the unique capsid organization of a dsRNA virus.
Pan J, Dong L, Lin L, Ochoa WF, Sinkovits RS, Havens WM, Nibert ML, Baker TS, Ghabrial SA, Tao YJ
Proc Natl Acad Sci U S A 106 4225-30 (2009)
PMID: 19246376

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo 120-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175540 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative capsid protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 420 amino acids
Theoretical weight: 46.59 KDa
Source organism: Penicillium stoloniferum virus F
UniProt:
  • Canonical: Q4G3H1 (Residues: 1-420; Coverage: 100%)
Structure domains: Zinc Finger, Delta Prime; domain 3

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F1
Spacegroup: F23
Unit cell:
a: 459.266Å b: 459.266Å c: 459.266Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.248 0.248 0.267

Quick links

Citations

10 review citations

Viruses of plant pathogenic fungi.
Ghabrial et al. (2009)
9 more

9 mentions without citation

Capsid Structure of dsRNA Fungal Viruses.
Luque et al. (2018)
8 more