› 3eil

X-ray diffraction
2.6Å resolution

Structure of B-DNA d(CGTTAATTAACG)2 in the presence of Manganese

Released:
DOI: 10.2210/pdb3eil/pdb
PDB 3eil coloured by chain and viewed from the front.
PDB 3eil coloured by chain and viewed from the side.
PDB 3eil coloured by chain and viewed from the top.
Source organism: Synthetic construct
Primary publication:
The interaction of manganese ions with DNA.
Millonig H, Pous J, Gouyette C, Subirana JA, Campos JL
J. Inorg. Biochem. 103 876-80 (2009)
PMID: 19375803

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*DCP*DGP*DTP*DTP*DAP*DAP*DTP*DTP*DAP*DAP*DCP*DG)-3' Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 12 nucleotides
Theoretical weight: 3.66 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand MN 7 x MN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM16
Spacegroup: P32
Unit cell:
a: 43.795Å b: 43.795Å c: 98.345Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.237 0.235 0.285
Expression system: Not provided

Quick links

Citations

12 citation in other articles

Formation of enantiomeric impeller-like helical architectures by DNA self-assembly and silica mineralization.
Liu et al. (2012)
11 more

2 mentions without citation

The many twists and turns of DNA: template, telomere, tool, and target.
Egli et al. (2010)
1 more