3dus

X-ray diffraction
1.95Å resolution

Crystal structure of SAG506-01, orthorhombic, twinned, crystal 1

Released:
Source organism: Mus musculus
Primary publication:
Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments.
Acta Crystallogr D Biol Crystallogr 64 1250-8 (2008)
PMID: 19018101

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-106135 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ig-like domain-containing protein Chains: A, C
Molecule details ›
Chains: A, C
Length: 112 amino acids
Theoretical weight: 12.35 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: A0N262 (Residues: 2-97, 98-112; Coverage: 97%)
Gene name: Vk
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins
Ig-like domain-containing protein Chains: B, D
Molecule details ›
Chains: B, D
Length: 121 amino acids
Theoretical weight: 13.44 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: A2NU21 (Residues: 19-119; Coverage: 100%)
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-002
Spacegroup: P212121
Unit cell:
a: 72.47Å b: 72.56Å c: 85.91Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.255 0.253 0.282
Expression system: Escherichia coli