Function and Biology

Crystal structure of CYP2R1 in complex with vitamin D3

Source organism: Homo sapiens
Biochemical function: D3 vitamins binding
Biological process: vitamin D biosynthetic process
Cellular component: intracellular membrane-bounded organelle

EC 1.14.14.24: Vitamin D 25-hydroxylase

Reaction catalysed:
Calciol + O(2) + [reduced NADPH--hemoprotein reductase] = calcidiol + [oxidized NADPH--hemoprotein reductase] + H(2)O
Systematic name:
Calciol,NADPH--hemoprotein reductase:oxygen oxidoreductase (25-hydroxylating)
Alternative Name(s):
  • CYP2R1
  • Vitamin D(2) 25-hydroxylase
  • Vitamin D(3) 25-hydroxylase

Sequence family

Pfam Protein family (Pfam)
PF00067
Domain description: Cytochrome P450
Occurring in:
  1. Vitamin D 25-hydroxylase
The deposited structure of PDB entry 3c6g contains 2 copies of Pfam domain PF00067 (Cytochrome P450) in Vitamin D 25-hydroxylase. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR002401
Domain description: Cytochrome P450, E-class, group I
Occurring in:
  1. Vitamin D 25-hydroxylase
IPR001128
Domain description: Cytochrome P450
Occurring in:
  1. Vitamin D 25-hydroxylase
IPR036396
Domain description: Cytochrome P450 superfamily
Occurring in:
  1. Vitamin D 25-hydroxylase
IPR017972
Domain description: Cytochrome P450, conserved site
Occurring in:
  1. Vitamin D 25-hydroxylase

Structure domain

CATH CATH domain
1.10.630.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Cytochrome p450
Homology: Cytochrome P450
Occurring in:
  1. Vitamin D 25-hydroxylase
The deposited structure of PDB entry 3c6g contains 2 copies of CATH domain 1.10.630.10 (Cytochrome p450) in Vitamin D 25-hydroxylase. Showing 1 copy in chain B.
SCOP SCOP annotation
48265
Class: All alpha proteins
Fold: Cytochrome P450
Superfamily: Cytochrome P450
Occurring in:
  1. Vitamin D 25-hydroxylase
The deposited structure of PDB entry 3c6g contains 2 copies of SCOP domain 48265 (Cytochrome P450) in Vitamin D 25-hydroxylase. Showing 1 copy in chain B.