› 3c29

X-ray diffraction
2.2Å resolution

Cre-loxP Synaptic structure

Released:
DOI: 10.2210/pdb3c29/pdb
PDB entry 3c29 coloured by chain, front view.
PDB entry 3c29 coloured by chain, side view.
PDB entry 3c29 coloured by chain, top view.
Source organism: Escherichia phage P1
Entry authors: Ghosh K, Van Duyne GD

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-116119 (preferred)
Entry contents:
1 distinct polypeptide molecule
3 distinct DNA molecules
Macromolecules (4 distinct):
Recombinase cre Chains: A, B, G, H
Molecule details ›
Chains: A, B, G, H
Length: 322 amino acids
Theoretical weight: 36.41 KDa
Source organism: Escherichia phage P1
Expression system: Not provided
UniProt:
  • Canonical: P06956 (Residues: 20-341; Coverage: 94%)
Gene name: cre
Sequence domains: Phage integrase family
Structure domains:
LoxP DNA, chain C, Chain: C
Molecule details ›
Chain: C
Length: 35 nucleotides
Theoretical weight: 10.79 KDa
Source organism: Escherichia phage P1
Expression system: Not provided
LoxP DNA, chain D,F Chains: D, F
Molecule details ›
Chains: D, F
Length: 34 nucleotides
Theoretical weight: 10.44 KDa
Source organism: Escherichia phage P1
Expression system: Not provided
LoxP DNA, chain E Chain: E
Molecule details ›
Chain: E
Length: 34 nucleotides
Theoretical weight: 10.49 KDa
Source organism: Escherichia phage P1
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand 1AP 2 x 1AP

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: P3221
Unit cell:
a: 136.413Å b: 136.413Å c: 218.826Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.194 0.192 0.228
Expression system: Not provided

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