PDBe 3vef

X-ray diffraction
2.64Å resolution

Rhodococcus jostii RHA1 DypB N246H variant in complex with heme

Released:

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DypB Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 353 amino acids
Theoretical weight: 37.56 KDa
Source organism: Rhodococcus jostii RHA1
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q0SE24 (Residues: 1-350; Coverage: 100%)
Gene name: RHA1_ro02407
Sequence domains: Dyp-type peroxidase family

Ligands and Environments

2 bound ligands:

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08B1-1
Spacegroup: P3221
Unit cell:
a: 132.306Å b: 132.306Å c: 158.79Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.159 0.156 0.206
Expression system: Escherichia coli BL21