PDBe 3jb0

Electron Microscopy
2.9Å resolution

Atomic model of cytoplasmic polyhedrosis virus with GTP

Released:
Source organism: Bombyx mori cypovirus 1
Related structures: EMD-6374

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assemblies composition:
hetero 300-mer (preferred)
hetero pentamer
hetero 25-mer
hetero 30-mer
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Structural protein VP3 Chain: A
Molecule details ›
Chain: A
Length: 1058 amino acids
Theoretical weight: 120.15 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: Q914N6 (Residues: 1-1058; Coverage: 100%)
Capsid protein VP1 Chains: B, C
Molecule details ›
Chains: B, C
Length: 1333 amino acids
Theoretical weight: 148.56 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: Q6TS43 (Residues: 1-1333; Coverage: 100%)
Viral structural protein 5 Chains: D, E
Molecule details ›
Chains: D, E
Length: 448 amino acids
Theoretical weight: 49.91 KDa
Source organism: Bombyx mori cypovirus 1
UniProt:
  • Canonical: C6K2M8 (Residues: 1-448; Coverage: 100%)
Gene name: VP5

Ligands and Environments

1 bound ligand:

No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.9Å
Relevant EMDB volumes: EMD-6374