PDBe 3hqv

Fiber diffraction
5.16Å resolution

Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement

Released:
Source organism: Rattus norvegicus
Primary publication:
Microfibrillar structure of type I collagen in situ.
Proc. Natl. Acad. Sci. U.S.A. 103 9001-5 (2006)
PMID: 16751282

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
hetero 27-mer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Collagen alpha-1(I) chain Chains: A, C
Molecule details ›
Chains: A, C
Length: 1056 amino acids
Theoretical weight: 96.75 KDa
Source organism: Rattus norvegicus
UniProt:
  • Canonical: P02454 (Residues: 152-1207; Coverage: 74%)
Gene name: Col1a1
Sequence domains: Collagen triple helix repeat (20 copies)
Collagen alpha-2(I) chain Chain: B
Molecule details ›
Chain: B
Length: 1028 amino acids
Theoretical weight: 93.48 KDa
Source organism: Rattus norvegicus
UniProt:
  • Canonical: P02466 (Residues: 86-1113; Coverage: 76%)
Gene name: Col1a2
Sequence domains: Collagen triple helix repeat (20 copies)

Ligands and Environments

No bound ligands

2 modified residues:

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 18-ID
Spacegroup: P1
Unit cell:
a: 39.97Å b: 26.95Å c: 677.9Å
α: 89.24° β: 94.59° γ: 105.58°
R-values:
R R work R free
0.066 not available not available