PDBe 3dd7

X-ray diffraction
1.7Å resolution

Structure of DocH66Y in complex with the C-terminal domain of Phd

Released:

Function and Biology Details

Reaction catalysed:
ATP + a protein = ADP + a phosphoprotein
Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Protein kinase doc Chains: A, C
Molecule details ›
Chains: A, C
Length: 135 amino acids
Theoretical weight: 14.78 KDa
Source organism: Escherichia virus P1
Expression system: Escherichia coli
UniProt:
  • Canonical: Q06259 (Residues: 1-126; Coverage: 100%)
Gene name: doc
Sequence domains: Fic/DOC family
Structure domains: Four Helix Bundle (Hemerythrin (Met), subunit A)
Antitoxin phd Chains: B, D
Molecule details ›
Chains: B, D
Length: 23 amino acids
Theoretical weight: 2.64 KDa
Source organism: Escherichia virus P1
Expression system: Not provided
UniProt:
  • Canonical: Q06253 (Residues: 51-73; Coverage: 32%)
Gene name: phd

Ligands and Environments

1 bound ligand:

1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X12
Spacegroup: C2
Unit cell:
a: 110.944Å b: 38.201Å c: 63.734Å
α: 90° β: 99.26° γ: 90°
R-values:
R R work R free
0.183 0.182 0.198
Expression systems:
  • Escherichia coli
  • Not provided