PDBe 2zme

X-ray diffraction
2.9Å resolution

Integrated structural and functional model of the human ESCRT-II complex

Released:
Source organism: Homo sapiens

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Vacuolar-sorting protein SNF8 Chain: A
Molecule details ›
Chain: A
Length: 258 amino acids
Theoretical weight: 28.9 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Best match: Q96H20 (Residues: 1-258)
Gene names: EAP30, SNF8
Vacuolar protein-sorting-associated protein 36 Chain: B
Molecule details ›
Chain: B
Length: 238 amino acids
Theoretical weight: 26.75 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Best match: Q86VN1 (Residues: 149-386)
Gene names: C13orf9, CGI-145, EAP45, VPS36
Vacuolar protein-sorting-associated protein 25 Chains: C, D
Molecule details ›
Chains: C, D
Length: 102 amino acids
Theoretical weight: 12.24 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Best match: Q9BRG1 (Residues: 1-102)
Gene names: DERP9, EAP20, VPS25

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P3212
Unit cell:
a: 81.48Å b: 81.48Å c: 226.244Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.219 0.214 0.313
Expression system: Escherichia coli