› 2xf4

X-ray diffraction
2.3Å resolution

Crystal structure of Salmonella enterica serovar typhimurium YcbL

Released:
DOI: 10.2210/pdb2xf4/pdb
PDB 2xf4 coloured by chain and viewed from the front.
PDB 2xf4 coloured by chain and viewed from the side.
PDB 2xf4 coloured by chain and viewed from the top.
Source organism: Salmonella enterica
Primary publication:
Structural and functional characterization of Salmonella enterica serovar Typhimurium YcbL: an unusual Type II glyoxalase.
Stamp AL, Owen P, El Omari K, Nichols CE, Lockyer M, Lamb HK, Charles IG, Hawkins AR, Stammers DK
Protein Sci. 19 1897-905 (2010)
PMID: 20669241

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HYDROXYACYLGLUTATHIONE HYDROLASE Chain: A
Molecule details ›
Chain: A
Length: 210 amino acids
Theoretical weight: 23.12 KDa
Source organism: Salmonella enterica
Expression system: Escherichia coli
Structure domains: Ribonuclease Z/Hydroxyacylglutathione hydrolase-like

Ligands and Environments

2 bound ligands:
Ligand ZN 1 x ZN
Ligand PG4 1 x PG4
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P41212
Unit cell:
a: 124.363Å b: 124.363Å c: 35.594Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 0.193 0.229
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Cells producing their own nemesis: understanding methylglyoxal metabolism.
Chakraborty et al. (2014)
1 more

1 mention without citation

Structural and functional characterization of Salmonella enterica serovar Typhimurium YcbL: an unusual Type II glyoxalase.
Stamp et al. (2010)