2vsk

X-ray diffraction
3.3Å resolution

Hendra virus attachment glycoprotein in complex with human cell surface receptor ephrinB2

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Glycoprotein G Chains: A, C
Molecule details ›
Chains: A, C
Length: 416 amino acids
Theoretical weight: 46.78 KDa
Source organism: Hendra henipavirus
Expression system: Homo sapiens
UniProt:
  • Canonical: O89343 (Residues: 188-603; Coverage: 69%)
Gene name: G
Structure domains: Neuraminidase
Ephrin-B2 Chains: B, D
Molecule details ›
Chains: B, D
Length: 138 amino acids
Theoretical weight: 15.77 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: P52799 (Residues: 28-165; Coverage: 45%)
Gene names: EFNB2, EPLG5, HTKL, LERK5
Sequence domains: Ephrin
Structure domains: Cupredoxins - blue copper proteins

Ligands and Environments

No bound ligands

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: P212121
Unit cell:
a: 56.25Å b: 106.17Å c: 196.16Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.3 0.3 0.35
Expression system: Homo sapiens