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Human C3c in complex with the inhibitor compstatin

Source organism: Homo sapiens
Biochemical function: endopeptidase inhibitor activity
Biological process: not assigned
Cellular component: extracellular region

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GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF01759
Domain description: UNC-6/NTR/C345C module
Occurring in:
  1. Complement C3c alpha' chain fragment 2
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF01759 (UNC-6/NTR/C345C module) in Complement C3c alpha' chain fragment 2. Showing 1 copy in chain F.

PF07677
Domain description: A-macroglobulin receptor binding domain
Occurring in:
  1. Complement C3c alpha' chain fragment 2
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF07677 (A-macroglobulin receptor binding domain) in Complement C3c alpha' chain fragment 2. Showing 1 copy in chain F.

PF21308
Domain description: Complement component 3, CUB domain 2
Occurring in:
  1. Complement C3c alpha' chain fragment 2

PF00207
Domain description: Alpha-2-macroglobulin family
Occurring in:
  1. Complement C3c alpha' chain fragment 1
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF00207 (Alpha-2-macroglobulin family) in Complement C3c alpha' chain fragment 1. Showing 1 copy in chain E.

PF07703
Domain description: Alpha-2-macroglobulin bait region domain
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF07703 (Alpha-2-macroglobulin bait region domain) in Complement C3 beta chain. Showing 1 copy in chain D.

PF17789
Domain description: Macroglobulin domain MG4
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF17789 (Macroglobulin domain MG4) in Complement C3 beta chain. Showing 1 copy in chain D.

PF17791
Domain description: Macroglobulin domain MG3
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF17791 (Macroglobulin domain MG3) in Complement C3 beta chain. Showing 1 copy in chain D.

PF01835
Domain description: MG2 domain
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF01835 (MG2 domain) in Complement C3 beta chain. Showing 1 copy in chain D.

PF17790
Domain description: Macroglobulin domain MG1
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of Pfam domain PF17790 (Macroglobulin domain MG1) in Complement C3 beta chain. Showing 1 copy in chain D.

InterPro InterPro annotations
IPR018933
Domain description: Netrin module, non-TIMP type
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR008993
Domain description: Tissue inhibitor of metalloproteinases-like, OB-fold
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR009048
Domain description: Alpha-macroglobulin, receptor-binding
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR036595
Domain description: Alpha-macroglobulin, receptor-binding domain superfamily
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Complement C3 beta chain
  2. Complement C3c alpha' chain fragment 1
IPR001134
Domain description: Netrin domain
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR035815
Domain description: Complement C3-like, NTR domain
Occurring in:
  1. Complement C3c alpha' chain fragment 2
IPR001599
Domain description: Alpha-2-macroglobulin
Occurring in:
  1. Complement C3c alpha' chain fragment 1
IPR011625
Domain description: Alpha-2-macroglobulin, bait region domain
Occurring in:
  1. Complement C3 beta chain
IPR040839
Domain description: Macroglobulin domain MG4
Occurring in:
  1. Complement C3 beta chain
IPR041555
Domain description: Macroglobulin domain MG3
Occurring in:
  1. Complement C3 beta chain
IPR002890
Domain description: Macroglobulin domain
Occurring in:
  1. Complement C3 beta chain
IPR041425
Domain description: Complement C3/4/5, macroglobulin domain MG1
Occurring in:
  1. Complement C3 beta chain

Structure domains

CATH CATH domains
2.60.40.1930
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulin-like
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 6 copies of CATH domain 2.60.40.1930 (Immunoglobulin-like) in Complement C3 beta chain. Showing 3 copies in chain D.
2.60.40.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulins
Occurring in:
  1. Complement C3 beta chain
  2. Complement C3c alpha' chain fragment 1
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Complement C3 beta chain. Showing 1 copy in chain D.
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Complement C3c alpha' chain fragment 1. Showing 1 copy in chain E.
2.40.50.120
Class: Mainly Beta
Architecture: Beta Barrel
Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P)
Homology: OB fold (Dihydrolipoamide Acetyltransferase, E2P)
Occurring in:
  1. Complement C3c alpha' chain fragment 2
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.40.50.120 (OB fold (Dihydrolipoamide Acetyltransferase, E2P)) in Complement C3c alpha' chain fragment 2. Showing 1 copy in chain F.
2.60.40.690
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Alpha-macroglobulin, receptor-binding domain
Occurring in:
  1. Complement C3c alpha' chain fragment 2
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.60.40.690 (Immunoglobulin-like) in Complement C3c alpha' chain fragment 2. Showing 1 copy in chain F.
2.20.130.20
Class: Mainly Beta
Architecture: Single Sheet
Topology: S-adenosyl-L-methionine-dependent methyltransferases
Homology: S-adenosyl-L-methionine-dependent methyltransferases
Occurring in:
  1. Complement C3c alpha' chain fragment 1
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.20.130.20 (S-adenosyl-L-methionine-dependent methyltransferases) in Complement C3c alpha' chain fragment 1. Showing 1 copy in chain E.
6.20.50.160
Class: Special
Architecture: Other non-globular
Topology: N-terminal domain of TfIIb
Homology: N-terminal domain of TfIIb
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 6.20.50.160 (N-terminal domain of TfIIb) in Complement C3 beta chain. Showing 1 copy in chain D.
2.60.40.1940
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulin-like
Occurring in:
  1. Complement C3 beta chain
The deposited structure of PDB entry 2qki contains 2 copies of CATH domain 2.60.40.1940 (Immunoglobulin-like) in Complement C3 beta chain. Showing 1 copy in chain D.

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