Protein Data Bank in Europe

Chain: A
Length: 240 amino acids
Theoretical weight: 25.35 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P20276 (Residues: 1-240; Coverage: 100%)

Gene names: rpl2, rrnAC1608
Pfam:

• Ribosomal Proteins L2, RNA binding domain
• Ribosomal Proteins L2, C-terminal domain

InterPro:

• Large ribosomal subunit protein uL2
• Nucleic acid-binding, OB-fold
• Large ribosomal subunit protein uL2, archaeal-type
• Large ribosomal subunit protein uL2, RNA-binding domain
• Large ribosomal subunit protein uL2, domain 2
• Large ribosomal subunit protein uL2, C-terminal
• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein uL2, domain 3
• Large ribosomal subunit protein uL2, conserved site

CATH:

• Nucleic acid-binding proteins
• SH3 type barrels.
• Ribosomal protein L2, domain 3

SCOP:

• Cold shock DNA-binding domain-like
• C-terminal domain of ribosomal protein L2

Chain: B
Length: 338 amino acids
Theoretical weight: 37.4 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P20279 (Residues: 1-338; Coverage: 100%)

Gene names: rpl3, rrnAC1611
Pfam: Ribosomal protein L3
InterPro:

• Large ribosomal subunit protein uL3
• Large ribosomal subunit protein uL3, archaeal
• Translation protein, beta-barrel domain superfamily
• Ribosomal protein L3, domain 3, archaeal-type superfamily
• Large ribosomal subunit protein uL3, archaeal/eukaryotic-type
• Large ribosomal subunit protein uL3, conserved site

CATH:

• Ribosomal protein L3, domain 3
• Translation factors
• Ribosomal Protein L3; Chain: B; domain 2,

SCOP: Ribosomal protein L3

Chain: C
Length: 246 amino acids
Theoretical weight: 26.44 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12735 (Residues: 1-246; Coverage: 100%)

Gene names: rpl4, rrnAC1610
Pfam: Ribosomal protein L4/L1 family
InterPro:

• Large ribosomal subunit protein uL4, archaea
• Large ribosomal subunit protein uL4 domain superfamily
• Large ribosomal subunit protein uL4, eukaryotic and archaeal type
• Large ribosomal subunit protein uL4
• Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved site

CATH: Ribosomal Protein L4; Chain: A;
SCOP: Ribosomal protein L4

Chain: D
Length: 177 amino acids
Theoretical weight: 19.55 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14124 (Residues: 1-177; Coverage: 100%)

Gene names: rpl5, rrnAC1598
Pfam:

• Ribosomal protein L5
• ribosomal L5P family C-terminus

InterPro:

• Large ribosomal subunit protein uL5
• Large ribosomal subunit protein uL5 domain superfamily
• Large ribosomal subunit protein uL5, archaeal
• Large ribosomal subunit protein uL5, N-terminal
• Large ribosomal subunit protein uL5, conserved site
• Large ribosomal subunit protein uL5, C-terminal

CATH: 50s Ribosomal Protein L5; Chain: A,
SCOP: Ribosomal protein L5

Chain: E
Length: 178 amino acids
Theoretical weight: 19.96 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14135 (Residues: 1-178; Coverage: 100%)

Gene names: rpl6, rrnAC1596
Pfam: Ribosomal protein L6
InterPro:

• Large ribosomal subunit protein uL6-like
• Large ribosomal subunit protein uL6, archaea
• Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
• Large ribosomal subunit protein uL6, alpha-beta domain
• Large ribosomal subunit protein uL6, conserved site-2

CATH: Ribosomal protein L6, alpha-beta domain
SCOP: Ribosomal protein L6

Chain: F
Length: 120 amino acids
Theoretical weight: 12.79 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12743 (Residues: 1-120; Coverage: 100%)

Gene names: rpl7ae, rrnAC0103
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
InterPro:

• Large ribosomal subunit protein eL8, archaea
• Ribosomal protein eL30-like superfamily
• Ribosomal protein eL8/eL30/eS12/Gadd45
• Ribosomal protein eL8/Nhp2 family
• Large ribosomal subunit protein eL8-like, conserved site

CATH: 60s Ribosomal Protein L30; Chain: A;
SCOP: L30e/L7ae ribosomal proteins

Chain: G
Length: 348 amino acids
Theoretical weight: 37.21 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P15825 (Residues: 1-348; Coverage: 100%)

Gene names: rpl10, rpl10e, rplP0, rrnAC1417
Pfam:

• Ribosomal protein L10
• Insertion domain in 60S ribosomal protein L10P

InterPro:

• Large ribosomal subunit protein uL10, archaea
• Large ribosomal subunit protein uL10-like domain superfamily
• Large ribosomal subunit protein uL10
• Large ribosomal subunit protein uL10-like, insertion domain superfamily
• Large ribosomal subunit protein uL10-like, insertion domain

SCOP: Ribosomal protein L10

Chain: H
Length: 171 amino acids
Theoretical weight: 19.07 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P60617 (Residues: 4-166; Coverage: 92%)

Gene names: rpl10e, rrnAC2357
Pfam: Ribosomal protein L16p/L10e
InterPro:

• Large ribosomal subunit protein uL16, eukaryotes/archaea
• Large ribosomal subunit protein uL16, archaea
• Large ribosomal subunit protein uL16 superfamily
• Large ribosomal subunit protein uL16
• Large ribosomal subunit protein uL16 domain
• Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea

CATH: Ribosomal protein L10e/L16
SCOP: Ribosomal protein L10e

Chain: J
Length: 145 amino acids
Theoretical weight: 16.25 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P29198 (Residues: 1-145; Coverage: 100%)

Gene names: rpl13, rrnAC0065
Pfam: Ribosomal protein L13
InterPro:

• Large ribosomal subunit protein uL13 superfamily
• Large ribosomal subunit protein uL13
• Large ribosomal subunit protein uL13, eukaryotic/archaeal
• Large ribosomal subunit protein uL13, conserved site

CATH: Ribosomal protein L13
SCOP: Ribosomal protein L13

Chain: K
Length: 132 amino acids
Theoretical weight: 14.19 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P22450 (Residues: 1-132; Coverage: 100%)

Gene names: rpl14, rrnAC1602
Pfam: Ribosomal protein L14p/L23e
InterPro:

• Large ribosomal subunit protein uL14 superfamily
• Large ribosomal subunit protein uL14, archaeal
• Large ribosomal subunit protein uL14
• Large ribosomal subunit protein uL14, conserved site

CATH: Ribosomal protein L14
SCOP: Ribosomal protein L14

Chain: L
Length: 165 amino acids
Theoretical weight: 18.01 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12737 (Residues: 1-165; Coverage: 100%)

Gene names: rpl15, rrnAC1590
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:

• Ribosomal uL15, N-terminal
• Large ribosomal subunit protein uL15
• Large ribosomal subunit protein uL15/eL18 superfamily
• Large ribosomal subunit protein uL15/eL18
• Large ribosomal subunit protein uL15, conserved site

CATH:

• Molecule: Ribosomal Protein L15; Chain: K; domain 1
• Ribosomal Protein L15; Chain: K; domain 2

SCOP: Ribosomal proteins L15p and L18e

Chain: M
Length: 194 amino acids
Theoretical weight: 22.16 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P60618 (Residues: 2-194; Coverage: 99%)

Gene names: rpl15e, rrnAC2065
Pfam: Ribosomal L15
InterPro:

• Large ribosomal subunit protein eL15 core domain superfamily
• Ribosomal protein uL23/eL15/eS24 core domain superfamily
• Large ribosomal subunit protein eL15, archaeal
• Large ribosomal subunit protein eL15
• Large ribosomal subunit protein eL15, conserved site

CATH: Ribosomal protein l15e
SCOP: L15e

Chain: N
Length: 187 amino acids
Theoretical weight: 20.64 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14123 (Residues: 1-187; Coverage: 100%)

Gene names: rpl18, rrnAC1593
Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18
InterPro: Large ribosomal subunit protein uL18 eukaryotic/archaeal
CATH: Nucleotidyltransferase; domain 5
SCOP: Ribosomal protein L18 and S11

Chain: O
Length: 116 amino acids
Theoretical weight: 12.44 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12733 (Residues: 1-116; Coverage: 100%)

Gene names: rpl18e, rrnAC0064
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:

• Large ribosomal subunit protein uL15/eL18 superfamily
• Large ribosomal subunit protein uL15/eL18
• Large ribosomal subunit protein uL15, conserved site
• Large ribosomal subunit protein eL18, archaea
• Large ribosomal subunit protein eL18
• Large ribosomal subunit protein eL18, conserved site

CATH: Ribosomal Protein L15; Chain: K; domain 2
SCOP: Ribosomal proteins L15p and L18e

Chain: P
Length: 149 amino acids
Theoretical weight: 16.8 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14119 (Residues: 1-149; Coverage: 100%)

Gene names: rpl19e, rrnAC1594
Pfam: Ribosomal protein L19e
InterPro:

• Large ribosomal subunit protein eL19, domain 1
• Large ribosomal subunit protein eL19
• Large ribosomal subunit protein eL19 domain
• Large ribosomal subunit protein eL19 superfamily
• Large ribosomal subunit protein eL19, archaeal
• Large ribosomal subunit protein eL19, conserved site
• Large ribosomal subunit protein eL19, domain 2
• Large ribosomal subunit protein eL19, domain 3

CATH:

• 50s Ribosomal Protein L19e, Chain O, domain 1
• Single Heli x bin
• Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A

SCOP: Ribosomal protein L19 (L19e)

Chain: Q
Length: 96 amino acids
Theoretical weight: 10.57 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12734 (Residues: 1-96; Coverage: 100%)

Gene names: rpl21e, rrnAC0260
Pfam: Ribosomal protein L21e
InterPro:

• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein eL21
• Large ribosomal subunit protein eL21 superfamily
• Large ribosomal subunit protein eL21, archaeal
• Large ribosomal subunit protein eL21, conserved site

CATH: Ribosomal protein L21
SCOP: Ribosomal proteins L24p and L21e

Chain: R
Length: 155 amino acids
Theoretical weight: 16.97 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P10970 (Residues: 1-155; Coverage: 100%)

Gene names: rpl22, rrnAC1606
Pfam: Ribosomal protein L22p/L17e
InterPro:

• Large ribosomal subunit protein uL22, eukaryotic/archaeal
• Ribosomal protein uL22 superfamily
• Large ribosomal subunit protein uL22
• Large ribosomal subunit protein uL22, conserved site

CATH: Ribosomal protein L22/L17
SCOP: Ribosomal protein L22

Chain: S
Length: 85 amino acids
Theoretical weight: 9.61 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12732 (Residues: 1-85; Coverage: 100%)

Gene names: rpl23, rrnAC1609
Pfam: Ribosomal protein L23
InterPro:

• Ribosomal protein uL23/eL15/eS24 core domain superfamily
• Nucleotide-binding alpha-beta plait domain superfamily
• Large ribosomal subunit protein uL23-like
• Large ribosomal subunit protein uL23
• Large ribosomal subunit protein uL23, conserved site

CATH: Alpha-Beta Plaits
SCOP: L23p

Chain: T
Length: 120 amino acids
Theoretical weight: 13.67 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P10972 (Residues: 1-120; Coverage: 100%)

Gene names: rpl24, rrnAC1601
Pfam:

• Ribosomal proteins L26 eukaryotic, L24P archaeal
• KOW motif

InterPro:

• Large ribosomal subunit protein uL2, domain 2
• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein uL24, eukaryotic/archaeal
• KOW
• Large ribosomal subunit protein uL24, conserved site
• Large ribosomal subunit protein uL24, KOW domain

CATH: SH3 type barrels.
SCOP: Ribosomal proteins L24p and L21e

Chain: U
Length: 66 amino acids
Theoretical weight: 7.23 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14116 (Residues: 2-67; Coverage: 99%)

Gene names: rpl24e, rrnAC0104
Pfam: Ribosomal protein L24e
InterPro:

• Large ribosomal subunit protein eL24-related
• Large ribosomal subunit protein eL24
• Ribosomal protein L24e/L24 superfamily
• TRASH domain
• Large ribosomal subunit protein eL24, conserved site

CATH: Ribosomal protein L24e
SCOP: Ribosomal protein L24e

Chain: V
Length: 71 amino acids
Theoretical weight: 7.89 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P10971 (Residues: 1-71; Coverage: 100%)

Gene names: rpl29, rrnAC1604
Pfam: Ribosomal L29 protein
InterPro:

• Large ribosomal subunit protein uL29 superfamily
• Large ribosomal subunit protein uL29
• Large ribosomal subunit protein uL29, conserved site

CATH: Helix Hairpins
SCOP: Ribosomal protein L29 (L29p)

Chain: W
Length: 154 amino acids
Theoretical weight: 17.06 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14121 (Residues: 1-154; Coverage: 100%)

Gene names: rpl30, rrnAC1591
Pfam: Ribosomal protein L30p/L7e
InterPro:

• Large ribosomal subunit protein uL30, archaeal
• Large ribosomal subunit protein uL30, eukaryotic/archaeal
• Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
• Large ribosomal subunit protein uL30
• Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
• Large ribosomal subunit protein uL30, conserved site

CATH:

• Ribosomal protein L30, ferredoxin-like fold domain
• 3-methyladenine DNA Glycosylase II; Chain A, domain 3

SCOP: Ribosomal protein L30p/L7e

Chain: X
Length: 92 amino acids
Theoretical weight: 10.38 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P18138 (Residues: 1-92; Coverage: 100%)

Gene names: rpl31e, rrnAC3113
Pfam: Ribosomal protein L31e
InterPro:

• Large ribosomal subunit protein eL31 domain superfamily
• Large ribosomal subunit protein eL31
• Large ribosomal subunit protein eL31, conserved site

CATH: Ribosomal Protein L31e; Chain: W;
SCOP: Ribosomal protein L31e

Chain: Y
Length: 241 amino acids
Theoretical weight: 26.46 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P12736 (Residues: 1-241; Coverage: 100%)

Gene names: rpl32e, rrnAC1595
Pfam:

• Helix-hairpin-helix domain
• Ribosomal protein L32

InterPro:

• DNA repair Rad51/transcription factor NusA, alpha-helical
• Helix-hairpin-helix DNA-binding motif, class 1
• Large ribosomal subunit protein eL32 superfamily
• Large ribosomal subunit protein eL32, archaeal
• Large ribosomal subunit protein eL32
• Large ribosomal subunit protein eL32, conserved site

SCOP: Ribosomal protein L32e

Chain: Z
Length: 73 amino acids
Theoretical weight: 8.29 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P60619 (Residues: 11-82; Coverage: 78%)

Gene names: rpl37ae, rrnAC1669
Pfam: Ribosomal L37ae protein family
InterPro:

• Large ribosomal subunit protein eL37/eL43
• Zinc-binding ribosomal protein
• Large ribosomal subunit protein eL43

CATH: N-terminal domain of TfIIb
SCOP: Ribosomal protein L37ae

Chain: 1
Length: 57 amino acids
Theoretical weight: 6.33 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P32410 (Residues: 1-57; Coverage: 100%)

Gene names: rpl37e, rrnAC0797.1
Pfam: Ribosomal protein L37e
InterPro:

• Large ribosomal subunit protein eL37/eL43
• Large ribosomal subunit protein eL37
• Zinc-binding ribosomal protein
• Large ribosomal subunit protein eL37, conserved site

CATH: N-terminal domain of TfIIb
SCOP: Ribosomal protein L37e

Chain: 2
Length: 50 amino acids
Theoretical weight: 6.13 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P22452 (Residues: 1-50; Coverage: 100%)

Gene names: rpl39e, rrnAC3112
Pfam: Ribosomal L39 protein
InterPro:

• Large ribosomal subunit protein eL39
• Large ribosomal subunit protein eL39 domain superfamily
• Large ribosomal subunit protein eL39, conserved site

CATH: Ribosomal protein L39e
SCOP: Ribosomal protein L39e

Chain: 3
Length: 92 amino acids
Theoretical weight: 10.82 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P32411 (Residues: 1-92; Coverage: 100%)

Gene names: rpl44e, rrnAC3514
Pfam: Ribosomal protein L44
InterPro:

• Zinc-binding ribosomal protein
• Large ribosomal subunit protein eL42

CATH: Nuclear Transport Factor 2; Chain: A,
SCOP: Ribosomal protein L44e

Chain: I
Length: 161 amino acids
Theoretical weight: 16.97 KDa
Source organism: Haloarcula marismortui
UniProt:

• Canonical: P14122 (Residues: 2-162; Coverage: 99%)

Gene names: rpl11, rrnAC1414
Pfam:

• Ribosomal protein L11, N-terminal domain
• Ribosomal protein L11, RNA binding domain

InterPro:

• Ribosomal protein uL11
• Large ribosomal subunit protein uL11, N-terminal domain superfamily
• Large ribosomal subunit protein uL11, N-terminal
• Large ribosomal subunit protein uL11, C-terminal domain superfamily
• Large ribosomal subunit protein uL11, C-terminal
• Large ribosomal subunit protein uL11, conserved site

CATH: Ribosomal protein L11, C-terminal domain
SCOP: Ribosomal protein L11, C-terminal domain